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Artículos

Año 8 No. 22 Enero - Abril 2022

Virus gigantes: En contra del orden conocido

DOI
https://doi.org/10.32399/icuap.rdic.2448-5829.2022.22.686
Enviado
diciembre 16, 2021
Publicado
enero 31, 2022

Resumen

El descubrimiento de los virus gigantes ha causado un desafío dentro del entendimiento del concepto mismo de virus, poniendo en duda su naturaleza, su composición, tamaño, funciones y propiedades que pueden presentar, así como el papel que estos jugaron en el desarrollo de la vida, la evolución y su origen viral, brindando nuevas perspectivas para el entendimiento de estos. Por lo que en este trabajo se presenta de forma clara todo lo que uno necesita saber acerca de estos nuevos virus gigantes, plasmando las características y generalidades de estos, su impacto en los conocimientos actuales que se tienen sobre este tipo de organismos, así como las implicaciones a futuro que podrían desencadenar en la salud humana.

Citas

  1. Abergel, C., & Claverie, J.-M. (2014). Pithovirus sibericum : réveil d’un virus géant de plus de 30 000 ans. Médecine/Sciences, 30(3), 329–331. https://doi.org/10.1051/medsci/20143003022
  2. Abergel, C., Legendre, M., & Claverie, J. M. (2015). The rapidly expanding universe of giant viruses: Mimivirus, Pandoravirus, Pithovirus and Mollivirus. FEMS Microbiology Reviews, 39(6), 779–796. https://doi.org/10.1093/FEMSRE/FUV037
  3. Abrahão, J. S., Araújo, R., Colson, P., & La Scola, B. (2017). The analysis of translation-related gene set boosts debates around origin and evolution of mimiviruses. PLoS Genetics, 13(2). https://doi.org/10.1371/JOURNAL.PGEN.1006532
  4. Abrahão, J., Silva, L., Santos Silva, L., Yaacoub Bou Khalil, J., Rodrigues, R., Arantes, T., Assis, F., Boratto, P., Andrade, M., Geessien Kroon, E., Ribeiro, B., Bergier, I., Seligmann, H., Ghigo, E., Colson, P., Levasseur, A., Kroemer, G., Raoult, D., & La Scola, B. (n.d.). Tailed giant Tupanvirus possesses the most complete translational apparatus of the known virosphere. https://doi.org/10.1038/s41467-018-03168-1
  5. Aherfi, S., Belhaouari, D. B., Pinault, L., Baudoin, J. P., Decloquement, P., Abrahao, J., Colson, P., Levasseur, A., Lamb, D. C., Chabriere, E., Raoult, D., & La Scola, B. (2021). Incomplete tricarboxylic acid cycle and proton gradient in Pandoravirus massiliensis: is it still a virus? The ISME Journal 2021, 1–10. https://doi.org/10.1038/s41396-021-01117-3
  6. Andreani, J., Verneau, J., Raoult, D., Levasseur, A., & La Scola, B. (2018). Deciphering viral presences: two novel partial giant viruses detected in marine metagenome and in a mine drainage metagenome. Virology Journal, 15(1). https://doi.org/10.1186/S12985-018-0976-9
  7. Arnold, C. (2014). Hints of Life’s Start Found in a Giant Virus. https://www.quantamagazine.org/were-giant-viruses-the-first-life-on-earth-20140710/
  8. Arslan, D., Legendre, M., Seltzer, V., Abergel, C., & Claverie, J. M. (2011). Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae. Proceedings of the National Academy of Sciences of the United States of America, 108(42), 17486–17491. https://doi.org/10.1073/PNAS.1110889108/-/DCSUPPLEMENTAL
  9. Bäckström, D., Yutin, N., Jørgensen, S. L., Dharamshi, J., Homa, F., Zaremba-Niedwiedzka, K., Spang, A., Wolf, Y. I., Koonin, E. V., & Ettema, T. J. G. (2019). Virus Genomes from Deep Sea Sediments Expand the Ocean Megavirome and Support Independent Origins of Viral Gigantism. MBio, 10(2), e02497-18. https://doi.org/10.1128/mBio.02497-18
  10. Bamford, D. H., Grimes, J. M., & Stuart, D. I. (2005). What does structure tell us about virus evolution? Current Opinion in Structural Biology, 15(6), 655–663. https://doi.org/10.1016/J.SBI.2005.10.012
  11. Bândea, C. I. (1983). A new theory on the origin and the nature of viruses. Journal of Theoretical Biology, 105(4), 591–602. https://doi.org/10.1016/0022-5193(83)90221-7
  12. Barik, S. (2018). A Family of Novel Cyclophilins, Conserved in the Mimivirus Genus of the Giant DNA Viruses. Computational and Structural Biotechnology Journal, 16, 231–236. https://doi.org/10.1016/J.CSBJ.2018.07.001
  13. Barthelemy, R.-M., Faure, E., & Goto, T. (2019). Serendipitous Discovery in a Marine Invertebrate (Phylum Chaetognatha) of the Longest Giant Viruses Reported till Date. Virology: Current Research, 3(1). https://www.omicsonline.org/
  14. Campos, R. K., Boratto, P. V., Assis, F. L., Aguiar, E. R. G. R., Silva, L. C. F., Albarnaz, J. D., Dornas, F. P., Trindade, G. S., Ferreira, P. P., Marques, J. T., Robert, C., Raoult, D., Kroon, E. G., La Scola, B., & Abrahão, J. S. (2014). Samba virus: a novel mimivirus from a giant rain forest, the Brazilian Amazon. Virology Journal, 11(1), 95. https://doi.org/10.1186/1743-422X-11-95
  15. Chen, P., Zhou, H., Huang, Y., Xie, Z., Zhang, M., Wei, Y., Li, J., Ma, Y., Luo, M., Ding, W., Cao, J., Jiang, T., Nan, P., Fang, J., & Li, X. (2021). Revealing the full biosphere structure and versatile metabolic functions in the deepest ocean sediment of the Challenger Deep. Genome Biology, 22(1), 207. https://doi.org/10.1186/s13059-021-02408-w
  16. Colson, P., La Scola, B., & Raoult, D. (2013). Giant Viruses of Amoebae as Potential Human Pathogens. Intervirology, 56(6), 376–385. https://doi.org/10.1159/000354558
  17. Colson, P., La Scola, B., & Raoult, D. (2017). Giant Viruses of Amoebae: A Journey Through Innovative Research and Paradigm Changes. Https://Doi.Org/10.1146/Annurev-Virology-101416-041816, 4, 61–85. https://doi.org/10.1146/ANNUREV-VIROLOGY-101416-041816
  18. DeBaldo, A. C. (2005). Virus. Van Nostrand’s Encyclopedia of Chemistry. https://doi.org/10.1002/0471740039.VEC2630
  19. Desnues, C., La Scola, B., Yutin, N., Fournous, G., Robert, C., Azza, S., Jardot, P., Monteil, S., Campocasso, A., Koonin, E. V., & Raoult, D. (2012). Provirophages and transpovirons as the diverse mobilome of giant viruses. Proceedings of the National Academy of Sciences of the United States of America, 109(44), 18078–18083. https://doi.org/10.1073/PNAS.1208835109/-/DCSUPPLEMENTAL/SAPP.PDF
  20. Fischer, M. G., Allen, M. J., Wilson, W. H., & Suttle, C. A. (2010). Giant virus with a remarkable complement of genes infects marine zooplankton. Proceedings of the National Academy of Sciences of the United States of America, 107(45), 19508–19513. https://doi.org/10.1073/PNAS.1007615107/-/DCSUPPLEMENTAL
  21. Forterre, P. (2016). To be or not to be alive: How recent discoveries challenge the traditional definitions of viruses and life. Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences, 59, 100–108. https://doi.org/10.1016/J.SHPSC.2016.02.013
  22. Forterre, P., & Krupovic, M. (2012). The Origin of Virions and Virocells: The Escape Hypothesis Revisited. Viruses: Essential Agents of Life, 9789400748996, 43–60. https://doi.org/10.1007/978-94-007-4899-6_3
  23. Garza, D. R., & Suttle, C. A. (1995). Large double-stranded DNA viruses which cause the lysis of a marine heterotrophic nanoflagellate (Bodo sp.) occur in natural marine viral communities. Aquatic Microbial Ecology, 9(3), 203–210. https://doi.org/10.3354/ame009203
  24. Gaze, W. H., Morgan, G., Zhang, L., & Wellington, E. M. H. (2011). Mimivirus-like particles in acanthamoebae from Sewage Sludge. Emerging Infectious Diseases, 17(6), 1127–1129. https://doi.org/10.3201/eid/1706.101282
  25. GISAID. (n.d.). GISAID - hCoV-19 Reference Sequence. GISAID. Retrieved November 29, 2021, from https://www.gisaid.org/references/hcov-19-reference-sequence/
  26. Graham, B. J. (2020). Virus | NHGRI. National Human Genome Research Institute. https://www.genome.gov/es/genetics-glossary/Virus
  27. Handelsman, J., Rondon, M. R., Brady, S. F., Clardy, J., & Goodman, R. M. (1998). Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chemistry & Biology, 5(10), R245–R249. https://doi.org/10.1016/S1074-5521(98)90108-9
  28. Koonin, E. V., & Starokadomskyy, P. (2016). Are viruses alive? The replicator paradigm sheds decisive light on an old but misguided question. Studies in History and Philosophy of Biological and Biomedical Sciences, 59, 125. https://doi.org/10.1016/J.SHPSC.2016.02.016
  29. Koonin, E. V., & Yutin, N. (2019). Evolution of the Large Nucleocytoplasmic DNA Viruses of Eukaryotes and Convergent Origins of Viral Gigantism. Advances in Virus Research, 103, 167–202. https://doi.org/10.1016/BS.AIVIR.2018.09.002
  30. Koonin, E. V., & Yutin, N. (2018). Multiple evolutionary origins of giant viruses. F1000Research, 7. https://doi.org/10.12688/F1000RESEARCH.16248.1/DOI
  31. Kou, Z., & Li, T. (2014). Pithovirus: a new giant DNA virus found from more than 30,000-year-old sample. Virologica Sinica, 29(2), 71–73. https://doi.org/10.1007/s12250-014-3451-9
  32. Krupovic, M., & Bamford, D. H. (2011). Double-stranded DNA viruses: 20 families and only five different architectural principles for virion assembly. In Current Opinion in Virology (Vol. 1, Issue 2, pp. 118–124). Curr Opin Virol. https://doi.org/10.1016/j.coviro.2011.06.001
  33. La Scola, B., Audic, S., Robert, C., Jungang, L., De Lamballerie, X., Drancourt, M., Birtles, R., Claverie, J. M., & Raoult, D. (2003). A giant virus in amoebae. Science (New York, N.Y.), 299(5615), 2033. https://doi.org/10.1126/SCIENCE.1081867
  34. Lagier, J.-C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., Bittar, F., Fournous, G., Gimenez, G., Maraninchi, M., Trape, J.-F., Koonin, E. V, La Scola, B., & Raoult, D. (2012). Microbial culturomics: paradigm shift in the human gut microbiome study. Clinical Microbiology and Infection : The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases, 18(12), 1185–1193. https://doi.org/10.1111/1469-0691.12023
  35. Lefkowitz, E. J., Dempsey, D. M., Hendrickson, R. C., Orton, R. J., Siddell, S. G., & Smith, D. B. (2018). Virus taxonomy: The database of the International Committee on Taxonomy of Viruses (ICTV). Nucleic Acids Research, 46(D1), D708–D717. https://doi.org/10.1093/nar/gkx932
  36. Legendre, M., Bartoli, J., Shmakova, L., Jeudy, S., Labadie, K., Adrait, A., Lescot, M., Poirot, O., Bertaux, L., Bruley, C., Coute, Y., Rivkina, E., Abergel, C., & Claverie, J.-M. (2014). Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology. Proceedings of the National Academy of Sciences, 111(11), 4274–4279. https://doi.org/10.1073/pnas.1320670111
  37. Levasseur, A., Bekliz, M., Chabrière, E., Pontarotti, P., La Scola, B., & Raoult, D. (2016). MIMIVIRE is a defence system in mimivirus that confers resistance to virophage. Nature, 531(7593), 249–252. https://doi.org/10.1038/NATURE17146
  38. Levasseur, A., Bekliz, M., Chabrière, E., Pontarotti, P., La Scola, B., & Raoult, D. (2016). MIMIVIRE is a defence system in mimivirus that confers resistance to virophage. Nature 2016 531:7593, 531(7593), 249–252. https://doi.org/10.1038/nature17146
  39. Lwoff, B. A. (1957). The Concept of Virus The Third Marjory Stephenson Memorial Lecture. Journal of General Microbiology Was Issued On, 17(1), 239–253.
  40. Méthot, P. O. (2016). Writing the history of virology in the twentieth century: Discovery, disciplines, and conceptual change. Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences, 59, 145–153. https://doi.org/10.1016/J.SHPSC.2016.02.011
  41. Monier, A., Chambouvet, A., Milner, D. S., Attah, V., Terrado, R., Lovejoy, C., Moreau, H., Santoro, A. E., Derelle, É., & Richards, T. A. (2017). Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton. Proceedings of the National Academy of Sciences of the United States of America, 114(36), E7489–E7498. https://doi.org/10.1073/PNAS.1708097114
  42. Moreira, D., & Brochier-Armanet, C. (2008). Giant viruses, giant chimeras: the multiple evolutionary histories of Mimivirus genes. BMC Evolutionary Biology, 8(1). https://doi.org/10.1186/1471-2148-8-12
  43. Mougari, S., Sahmi-Bounsiar, D., Levasseur, A., Colson, P., & Scola, B. La. (2019). Virophages of Giant Viruses: An Update at Eleven. Viruses, 11(8). https://doi.org/10.3390/V11080733
  44. Nasir, A., Romero-Severson, E., & Claverie, J. M. (2020). Investigating the Concept and Origin of Viruses. Trends in Microbiology, 28(12), 959–967. https://doi.org/10.1016/J.TIM.2020.08.003
  45. Popgeorgiev, N., Temmam, S., Raoult, D., & Desnues, C. (2013). Describing the Silent Human Virome with an Emphasis on Giant Viruses. Intervirology, 56(6), 395–412. https://doi.org/10.1159/000354561
  46. Popgeorgiev, N., Boyer, M., Fancello, L., Monteil, S., Robert, C., Rivet, R., Nappez, C., Azza, S., Chiaroni, J., Raoult, D., & Desnues, C. (2013). Marseillevirus-Like Virus Recovered From Blood Donated by Asymptomatic Humans. The Journal of Infectious Diseases, 208(7), 1042–1050. https://doi.org/10.1093/infdis/jit292
  47. Raoult, D., & Forterre, P. (2008). Redefining viruses: Lessons from Mimivirus. Nature Reviews Microbiology, 6(4), 315–319. https://doi.org/10.1038/nrmicro1858
  48. Rodrigues, R. A. L., Andrade, A. C. d. S. P., Oliveira, G. P., & Abrahão, J. S. (2021). Giant Viruses and Their Virophage Parasites. In Encyclopedia of Virology (pp. 372–381). Elsevier. https://doi.org/10.1016/B978-0-12-809633-8.20924-2
  49. Rodrigues, R. A. L., Abrahão, J. S., Drumond, B. P., & Kroon, E. G. (2016). Giants among larges: how gigantism impacts giant virus entry into amoebae. Current Opinion in Microbiology, 31, 88–93. https://doi.org/10.1016/J.MIB.2016.03.009
  50. Santos López, G., Borraz Arguello, M., & Reyes Leyva, R. J. (2004). La naturaleza e importancia de los virus. Elementos: Ciencia y Cultura, 11(53), 25–31.
  51. Scarpellini, E., Ianiro, G., Attili, F., Bassanelli, C., De Santis, A., & Gasbarrini, A. (2015). The human gut microbiota and virome: Potential therapeutic implications. Digestive and Liver Disease, 47(12), 1007–1012. https://doi.org/10.1016/j.dld.2015.07.008
  52. Schulz, F., Alteio, L., Goudeau, D., Ryan, E. M., Yu, F. B., Malmstrom, R. R., Blanchard, J., & Woyke, T. (2018). Hidden diversity of soil giant viruses. Nature Communications, 9(1). https://doi.org/10.1038/S41467-018-07335-2
  53. Schulz, F., Yutin, N., Ivanova, N. N., Ortega, D. R., Lee, T. K., Vierheilig, J., Daims, H., Horn, M., Wagner, M., Jensen, G. J., Kyrpides, N. C., Koonin, E. V., & Woyke, T. (2017). Giant viruses with an expanded complement of translation system components. Science, 356(6333), 82–85. https://doi.org/10.1126/SCIENCE.AAL4657/SUPPL_FILE/SCHULZ.SM.PDF
  54. Schvarcz, C. R., & Steward, G. F. (2018). A giant virus infecting green algae encodes key fermentation genes. Virology, 518, 423–433. https://doi.org/10.1016/J.VIROL.2018.03.010
  55. Siddell, Stuart; Davison, A. (2020, July). What is the point of virus taxonomy? International Science Council. https://council.science/current/blog/whats-the-point-of-virus-taxonomy/
  56. Vardi, A., Haramaty, L., Van Mooy, B. A. S., Fredricks, H. F., Kimmance, S. A., Larsen, A., & Bidle, K. D. (2012). Host-virus dynamics and subcellular controls of cell fate in a natural coccolithophore population. Proceedings of the National Academy of Sciences of the United States of America, 109(47), 19327–19332. https://doi.org/10.1073/PNAS.1208895109/-/DCSUPPLEMENTAL
  57. Wommack, K. E., Williamson, K. E., Helton, R. R., Bench, S. R., & Winget, D. M. (2009). Methods for the isolation of viruses from environmental samples. Methods in Molecular Biology (Clifton, N.J.), 501, 3–14. https://doi.org/10.1007/978-1-60327-164-6_1
  58. Yutin, N., Colson, P., Raoult, D., & Koonin, E. V. (2013). Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family. Virology Journal, 10. https://doi.org/10.1186/1743-422X-10-106